Prediction of noncovalent interactions for PDB structure COMPLEX_1_PROTEIN
==========================================================================
Created on 2026/03/31 using PLIP v2.2.2

If you are using PLIP in your work, please cite:
Adasme,M. et al. PLIP 2021: expanding the scope of the protein-ligand interaction profiler to DNA and RNA. Nucl. Acids Res. (05 May 2021), gkab294. doi: 10.1093/nar/gkab294
Analysis was done on model 1.

UNK:d:0 (UNK) - SMALLMOLECULE
-----------------------------
Interacting chain(s): A,B,C


**Hydrophobic Interactions**
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+--------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | LIGCARBONIDX | PROTCARBONIDX | LIGCOO                  | PROTCOO                  | 
+=======+=========+==========+===========+=============+==============+======+==============+===============+=========================+==========================+
| 228   | ASN     | B        | 0         | UNK         | d            | 3.56 | 18           | 5951          | 154.837, -6.791, -8.734 | 154.259, -7.234, -5.245  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+--------------------------+
| 231   | LEU     | A        | 0         | UNK         | d            | 3.62 | 27           | 1712          | 155.966, -2.086, -9.228 | 156.985, -1.307, -12.616 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+--------------------------+


**Hydrogen Bonds**
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | SIDECHAIN | DIST_H-A | DIST_D-A | DON_ANGLE | PROTISDON | DONORIDX | DONORTYPE | ACCEPTORIDX | ACCEPTORTYPE | LIGCOO                    | PROTCOO                   | 
+=======+=========+==========+===========+=============+==============+===========+==========+==========+===========+===========+==========+===========+=============+==============+===========================+===========================+
| 85    | LYS     | A        | 0         | UNK         | d            | False     | 2.33     | 2.70     | 101.85    | False     | 42       | O3        | 626         | O2           | 155.097, 3.819, -11.757   | 154.695, 2.969, -14.288   | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 85    | LYS     | C        | 0         | UNK         | d            | True      | 2.40     | 3.01     | 117.66    | True      | 9187     | N3+       | 54          | O3           | 162.079, -10.224, -13.096 | 164.052, -11.018, -15.228 | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 88    | ASN     | A        | 0         | UNK         | d            | True      | 2.43     | 3.35     | 149.28    | True      | 669      | Nam       | 44          | O3           | 152.628, 3.442, -10.272   | 150.445, 5.604, -11.607   | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 224   | GLN     | B        | 0         | UNK         | d            | True      | 3.36     | 3.83     | 111.70    | False     | 48       | O3        | 5909        | O2           | 156.154, -10.863, -9.538  | 153.759, -13.750, -10.292 | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 225   | GLN     | A        | 0         | UNK         | d            | True      | 2.56     | 3.19     | 119.97    | True      | 1640     | Nam       | 54          | O3           | 162.079, -10.224, -13.096 | 159.729, -11.403, -14.911 | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 228   | ASN     | A        | 0         | UNK         | d            | True      | 2.86     | 3.58     | 128.84    | True      | 1675     | Nam       | 8           | O.co2        | 165.284, -7.461, -10.654  | 162.983, -5.524, -12.603  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 228   | ASN     | B        | 0         | UNK         | d            | True      | 3.13     | 4.06     | 153.35    | True      | 5953     | Nam       | 29          | O3           | 153.117, -2.304, -6.934   | 155.587, -5.207, -5.524   | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 228   | ASN     | C        | 0         | UNK         | d            | True      | 2.28     | 3.01     | 131.69    | False     | 52       | O3        | 10234       | O2           | 162.316, -12.022, -9.957  | 163.207, -11.542, -7.118  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 232   | GLU     | C        | 0         | UNK         | d            | True      | 2.33     | 2.81     | 109.49    | False     | 9        | O.co2     | 10279       | O2           | 163.809, -7.360, -8.920   | 165.090, -8.368, -6.630   | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+
| 250   | TYR     | A        | 0         | UNK         | d            | True      | 2.23     | 3.10     | 152.22    | True      | 1889     | O3        | 8           | O.co2        | 165.284, -7.461, -10.654  | 165.470, -5.091, -8.666   | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+---------------------------+---------------------------+


**Salt Bridges**
+-------+---------+----------+-------------------+-----------+-------------+--------------+------+-----------+-------------+--------------+-------------------------+-------------------------+
| RESNR | RESTYPE | RESCHAIN | PROT_IDX_LIST     | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | PROTISPOS | LIG_GROUP   | LIG_IDX_LIST | LIGCOO                  | PROTCOO                 | 
+=======+=========+==========+===================+===========+=============+==============+======+===========+=============+==============+=========================+=========================+
| 235   | ARG     | A        | 1750,1753,1756    | 0         | UNK         | d            | 3.98 | True      | Carboxylate | 31,33        | 155.305, 0.423, -8.769  | 158.845, 0.109, -6.979  | 
+-------+---------+----------+-------------------+-----------+-------------+--------------+------+-----------+-------------+--------------+-------------------------+-------------------------+
| 235   | ARG     | A        | 1750,1753,1756    | 0         | UNK         | d            | 4.24 | True      | Carboxylate | 39,40        | 157.982, 2.856, -10.094 | 158.845, 0.109, -6.979  | 
+-------+---------+----------+-------------------+-----------+-------------+--------------+------+-----------+-------------+--------------+-------------------------+-------------------------+
| 235   | ARG     | C        | 10306,10309,10312 | 0         | UNK         | d            | 3.80 | True      | Carboxylate | 8,9          | 164.546, -7.411, -9.787 | 168.299, -6.979, -9.345 | 
+-------+---------+----------+-------------------+-----------+-------------+--------------+------+-----------+-------------+--------------+-------------------------+-------------------------+


**pi-Cation Interactions**
+-------+---------+----------+---------------+-----------+-------------+--------------+------+--------+-------------+-----------+-------------------+-------------------------+--------------------------+
| RESNR | RESTYPE | RESCHAIN | PROT_IDX_LIST | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | OFFSET | PROTCHARGED | LIG_GROUP | LIG_IDX_LIST      | LIGCOO                  | PROTCOO                  | 
+=======+=========+==========+===============+===========+=============+==============+======+========+=============+===========+===================+=========================+==========================+
| 85    | LYS     | A        | 631           | 0         | UNK         | d            | 3.47 | 1.07   | True        | Aromatic  | 23,24,25,26,27,28 | 155.190, -3.054, -8.590 | 152.962, -4.138, -11.018 | 
+-------+---------+----------+---------------+-----------+-------------+--------------+------+--------+-------------+-----------+-------------------+-------------------------+--------------------------+



